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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815363.1_cds_XP_016498283.1_12329
CDS Infomation

[gene=LOC107817028] [db_xref=GeneID:107817028] [protein=nuclear pore complex protein NUP98A-like] [protein_id=XP_016498283.1] [location=complement(join(3829..4415,5234..5399,5614..5730,6058..6187,6362..6404,6499..6562,6779..7449,7536..7745,7938..8183,8687..8804))] [gbkey=CDS]
Sequence

ATGCTGCTAAAGGACGGTCTTGAAGCTGTCAAAAGAGAGAAAACAATTGATCACTATGTT
AATTATGTAACTAAGGAAGTTGTTCTACAAATATCACAATCAACCTGCAGGAGAAAAAAG
AAATCAATTCAGTCTGCTTCTGGTACTGCAGGAACCACAGCCTTTAATGCAACAAACAAT
GCTACAACTTTACAAACACAAGACAAATCTCTGGGCTCGTCGTCCACTTTACCAACATTT
GGAAAGAAATATGAAGGTAATAGTGTGGCCTATAAACCTCTGTTGTGGTCCAGAGATGTC
AGTGTTTCAGACTCCTCAATATTTGGTTCCTACTCCTTCGGCCAGCCAGCAGTATCCACG
TCAGGAAAAGTAGTTACTACACCATTGCTCAAGAGCTCTGATTTTGGAAAGTCAGCATTC
GGTATTAATCAGAAAGGAAGTAGAATAGCATCATACACTGCAACTAAAGAGAAAGAGAGC
AAGGAAAAAATTCAATCCATTAGTGGCATGCAGGCTTATGAAGATAAAAGCCACGAAGAG
TTGAGGTTTGAGGACTATCAGTTAGGTGATAAAGGTCCGACATGTGCTTCTATATTTGGT
GATTCAGGCACATCTAAATTTGGTGTCATTGACAAATCCAGGCCTTTCACATCACCAGTA
TTTAACCCATCCACTGTTAATCAACCTTTTCATTCTCATTGTCCAAATCCATTTGCCGTG
AAAAGACCAGGGATTGACTCACTACCAAATGAAAATTCTATCACAACTTCATCTACCCCA
TTATTTCCAAAGTCACAGCAGTCAACTGTTTCCCATATATTTCCCCCCAAAACATCATTC
TTAAACTCAGATGTTTCTTCTTCTCCATGGACCAATTCAAGCCCTTTTGCATCTTTAAAA
GCAGCTTCTACTTCTTCCACTACCTCCATCTTTTCTCCGTCAAGTAATCCATGGGCTTTA
TCAACGTCTTCTGCTCTATCGTCTCCACTGTCTACTGCTTCTCCATGTTTGGTCTCACCT
TCCCGAGCCCATCATTTTGATCAGAATCGCTCTTTCTCTACTTTTAACTTGCCCACCTTA
CCTTCTGTATCACCTCCATCCCTTCTTCCAACTCCTGTCTCGACTACAGCACCAGCTCAA
TCATCCTGGCAGTTGCAGCCTACTTTACCAAGCCTTTTTAATGTTCCAAGCACACCATCC
TCTTTGTTTCCCACATTCGTTCCACTTGCTCCTAGTCAAATTACTCCAGAAAAGACTCCT
AATAGTGAAGCAACAATTTCACCGGCCATCTCTTCTCAGCCATTGACAGAAAATGGACAA
GGAGTTGGTCATCCGGGTATCAATGTGCAACAGTCTTACTCTCCAAGCATCACAGGGTTG
CAGCCATCTATGGTTCCTTCTGAAACAAAACCTGAAGTCCAGGTATTCGCTGGACGCCCA
GATTCAGCAACATCCGTACAGTATGGAATATCAAGCTTACCTGTTTCTGACAAAACTGCT
CTGGTCAGACGAAGATCCTCGTTGATAATTCGACATTCATCTCTAAGTCGGCATAGGTTG
CCACCTCAAAAATACAATCCTGCAAGTGATAAACCAAAGGTTCCCTTTTTTATGGGTAAA
GAAAATGCTTCTGGCATAGTAAGGAAAGAAGTTGTGATCATTTCAAGGGAAAATCCAAGG
GATTGGGTTCATCCTACCGCTAGAGAATTTCCTATGGGGTCTGATTCATGTATATTGTCT
CAACTGAAGCATACATCTGCGGACGGGATGCACGATGGAGTCAAAGTTAATGACAAGCCT
AACTTAGCGCCTGAAGAGAAGATGCATCATGATAAATCTGGACACCAAGTTTCAGCTGAA
GCATTAAAGGATAGCAAGCATGATTATAAGGATATTGATGCCATAATGCCCGAGCTTCAA
CGCTCTGATTACTACACAGTTCCTACTATCCAGGAATTAATGTCAAAGGAGAAGGAAGAT
CCTGGTTTCTGTAGCCACGTGAAGAACTTTGTGGTCGGAAGATATGGCTTTGGAAGCATC
ACGTTCTTGGGAGAAACAGATGTCCGGAATCTTGATCTTGATTCTGCTGTCCATTTTAAG
TGTCGTGAGGTGATCATCAATATGGACGAGAGCAAGAAACCCTCAGTTGGACAAGGCCTC
AACAAGCCAGCTGAGATAACTCTCCTTAATGTCAAATGCATCAACAAATCGAACGGGAAG
GAGTACACAGATGGACCAGTGGTTAACAAGTACAGAGATATGCTTGTTAAGAAAGCAGTA
GAGCAAGGTGCAGAATTTGTTTCTTATGATCCAGTGCAAGGGCAGTGGAAATTTAGGGTC
TCACACTTCTAG

Peptide Sequence

PEP ID

XP_016498283.1
PEP Infomation

PREDICTED: nuclear pore complex protein NUP98A-like [Nicotiana tabacum]
Sequence

MLLKDGLEAVKREKTIDHYVNYVTKEVVLQISQSTCRRKKKSIQSASGTAGTTAFNATNN
ATTLQTQDKSLGSSSTLPTFGKKYEGNSVAYKPLLWSRDVSVSDSSIFGSYSFGQPAVST
SGKVVTTPLLKSSDFGKSAFGINQKGSRIASYTATKEKESKEKIQSISGMQAYEDKSHEE
LRFEDYQLGDKGPTCASIFGDSGTSKFGVIDKSRPFTSPVFNPSTVNQPFHSHCPNPFAV
KRPGIDSLPNENSITTSSTPLFPKSQQSTVSHIFPPKTSFLNSDVSSSPWTNSSPFASLK
AASTSSTTSIFSPSSNPWALSTSSALSSPLSTASPCLVSPSRAHHFDQNRSFSTFNLPTL
PSVSPPSLLPTPVSTTAPAQSSWQLQPTLPSLFNVPSTPSSLFPTFVPLAPSQITPEKTP
NSEATISPAISSQPLTENGQGVGHPGINVQQSYSPSITGLQPSMVPSETKPEVQVFAGRP
DSATSVQYGISSLPVSDKTALVRRRSSLIIRHSSLSRHRLPPQKYNPASDKPKVPFFMGK
ENASGIVRKEVVIISRENPRDWVHPTAREFPMGSDSCILSQLKHTSADGMHDGVKVNDKP
NLAPEEKMHHDKSGHQVSAEALKDSKHDYKDIDAIMPELQRSDYYTVPTIQELMSKEKED
PGFCSHVKNFVVGRYGFGSITFLGETDVRNLDLDSAVHFKCREVIINMDESKKPSVGQGL
NKPAEITLLNVKCINKSNGKEYTDGPVVNKYRDMLVKKAVEQGAEFVSYDPVQGQWKFRV
SHF

Transcript Sequence

Gene sequence data has not been registered.